There are plenty of tips on this forum to get rid of that annoying low speed snatchiness.
Step one is to get the O2 sensors disconnected.

I did most of the mods mentioned on this forum and I had it dyno'd and the PCIII adjusted last week, puls smooth from 2000rpm now and heaps more beans...
Highly recommended.I can make you a list of all the mods to do. But better wait till after first service.

Here is the thread with all the basic mods. it can be found in the "How to do it" section.

http://www.superduke.net/forum/viewtopic.php?t=687

Here it goes, what I've done so far engine wise:
O2 sensor eliminators, disconnect 2nd-3rd gear restrictor, Mivv cans, remove secondary butterflies, SAS removed, butterflies balanced, custom home made airbox-filter.(get one from motohooligan in parts section)PCIII with custom map.

Sadly the best results are from O2 sensors and custom map, this means you have to get a PCIII or tuneboy and sort the exhaust also, which means $$$

On a positive note I probably save the costs back in a year on petrol and it's sooo smooth on the trottle. HP from 109 up to 113. (very conservative dyno I have been told... )

Ahhh and forgot one tooth down on the front sprocket...